Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015859862.1_cds_XP_016514465.1_26911
CDS Infomation

[gene=LOC107831230] [db_xref=GeneID:107831230] [protein=signal recognition particle 54 kDa protein 2-like] [protein_id=XP_016514465.1] [location=complement(join(2603..2949,3022..3136,3592..3749,3899..3999,5202..5350,5424..5574,6366..6519,6710..6809,7260..7490))] [gbkey=CDS]
Sequence

ATGGTGTTAGCACAATTAGGGGGGAGCATATCACGTGCTCTCCAGCAAATGAGCAATGCC
ACAATCATTGATGAGAAAGTTCTCAACGAATGCCTCAATGAAATTACACGTGCTCTTCTT
CAAGCTGATGTTCAGTTTAAGCTTGTCCGTGATATGACTACCAATATTAAGAAAATTGTT
AATCTTGATGATCTTGCTGCTGGGCACAACAAGCGTAGGATTATTCAACAGGCGGTCTTT
AATGAGCTCTGCAAGATATTGGATCCTGGGAAGCCTTCTTTTACACCAAAAAAGGGGAAA
CCCAGTGTTGTCATGTTTGTTGGTTTGCAAGGGTCTGGAAAGACAACAACATGTACAAAG
TATGCATACTACCACCAGAAAAAAGGTTGGAAACCAGCTTTAGTGTGTGCGGATACATTC
AGAGCTGGTGCTTTCGATCAGTTGAAGCAGAACGCCACAAAAGCCAAGATACCCTTTTAT
GGAAGCTACACGGAGTCAGACCCTGTGAGAATAGCTGCTGAAGGTGTTGAAACATTTAAG
AAGGAAAATTGTGATCTAATAATTGTTGATACCAGTGGGCGCCACAAACAAGAAGCTGCT
CTTTTTGAAGAGATGCGACAAGTTTCTGAAGCAACGGAACCAGATCTTGTGATATTTGTT
ATGGATAGCAGTATCGGTCAAGCTGCGTTTGATCAAGCTCAAGCATTTAAGCAAAGTGTC
GCAGTTGGAGCTGTAATTGTTACTAAGATGGATGGCCATGCAAAAGGAGGTGGTGCCCTC
AGTGCAGTTGCTGCAACAAAAAGTCCCGTCATATTTATTGGAACTGGCGAACACATGGAT
GAGTTTGAAGTTTTCGATGTTAAGCCATTTGTCAGCCGTCTTTTAGGCATGGGCGACTGG
TCTGGGTTCATGGACAAGATACATGAAGTTGTCCCGATGGATCAACAGCCTGAGCTTCTT
CAGAAGCTATCGGAAGGACACTTTACCTTGAGGATAATGTATGAGCAATTTCAAAACATA
CTTAAAATGGGCCCCATTGGCCAGGTCTTCTCAATGCTTCCAGGATTCAGTGCAGAGTTG
ATGCCAAAAGGCCGCGAAAAGGAAAGCCGGGCAAAAATTAAACGATACATGACAATGATG
GATTCAATGACTAATGAAGAATTGGATAGCTCCAACCCAAAGCTTATGACAGAATCCCGA
ATTATGCGGATAGCTAGGGGCTCTGGTCGCCAAGTGCATGAGGTGATGGAAATGATGGAG
GAATACAAACGACTGGCAAAGATATGGAGTAAGATGAAGGGGCTTAAGATTCCAAAGAAG
GGAGAGATGAGTGCCCTGTCTCGAAATATGAATGCGCAACACATGAGCAAAGTCCTGCCC
CCTCAGATGTTGAAGCAAATAGGTGGCATGGGTGGTTTGCAGAACTTGATGAAGCAAATG
GGCGGAATGGGTGGAATGGGTTCCGCCAAGGACATGATGGGTATGTTTGGTGGTGGAGAT
AAGTAA

Peptide Sequence

PEP ID

XP_016514465.1
PEP Infomation

PREDICTED: signal recognition particle 54 kDa protein 2-like [Nicotiana tabacum]
Sequence

MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV
NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK
YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVRIAAEGVETFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATEPDLVIFVMDSSIGQAAFDQAQAFKQSV
AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL
MPKGREKESRAKIKRYMTMMDSMTNEELDSSNPKLMTESRIMRIARGSGRQVHEVMEMME
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM
GGMGGMGSAKDMMGMFGGGDK

Transcript Sequence

Gene sequence data has not been registered.